agglovar.expr.variant

Polars expressions used by variant calling routines.

Attributes

id_expr	Expression for generating variant IDs including alias "id" for the result (ideal for with_column()).
id_expr_noalias	Expression for generating variant IDs.
id_nonsnv_expr	Expression for generating non-SNV IDs.
id_snv_expr	Expression for generating SNV IDs.
sort_cols	Sort columns for variant tables.

Module Contents

agglovar.expr.variant.id_expr

Expression for generating variant IDs including alias “id” for the result (ideal for with_column()).

agglovar.expr.variant.id_expr_noalias

Expression for generating variant IDs.

agglovar.expr.variant.id_nonsnv_expr

Expression for generating non-SNV IDs.

agglovar.expr.variant.id_snv_expr

Expression for generating SNV IDs.

agglovar.expr.variant.sort_cols

Sort columns for variant tables.